What is spatial transcriptomics? - Bioinformatics Hub

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Tagged: spatial transcriptomics

This topic has 2 replies, 3 voices, and was last updated 2 years, 11 months ago by K. Raji.

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- 2023-11-19 at 9:13 am #3353
  Mahi Bashat
  Participant
  I need a short explanation of what spatial transcriptomics is and its use.
  
  Thank you.
- 2023-11-19 at 4:24 pm #3354
  Fazil Hussein
  Moderator
  Spatial transcriptomics is a method for assigning cell types (identified by the mRNA readouts) to their locations in the histological sections and can also be used to determine subcellular localization of mRNA molecules. First described in 2016 by Ståhl et al., it has since undergone a variety of improvements and modifications.
  
  Spatial transcriptomics – Wikipedia
- 2023-11-20 at 6:59 pm #3355
  K. Raji
  Participant
  I recommend reading this article:
  
  Method of the Year: spatially resolved transcriptomics
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